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Easy Egg Bites Recipe with 5 Flavor Variations

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Egg bites make breakfast feel totally doable, even on the busiest mornings. They start with a super simple 2-ingredient base and turn out fluffy, flavorful, and filling. You can mix and match whatever add-ins you like, so every batch feels a little different. 

Baked muffins featuring visible slices of ham offer a savory, handheld breakfast option.

For easy, to-go breakfasts, I used to only make mini salmon quiche or a breakfast sandwich. When there’s a crowd, I found that having a tray of egg bites ready makes mornings way easier.

They’re protein-packed, easy to customize, and a great way to use up leftovers. Chopped meat, frozen veggies, and whatever cheese you’ve got all work perfectly. I usually bake a dozen, keep a few in the fridge, and freeze the extras for later. They reheat well in the microwave or oven without drying out; making breakfast, a snack, or packing a lunchbox as simple as heat and eat. 

Why This Recipe Works

  • Meal prep win
  • Easy to make
  • Use up leftovers
  • Perfect for brunch
  • Good anytime
  • Great for groups
These egg muffins are loaded with chopped green onions, are cooling on a black wire rack.

How to Make Egg Bites

The best part about making egg bite muffins is how easy they are to change up. Once you’ve got the base down, it’s fun to mix in whatever you’re craving or need to use up from the fridge. It’s a simple way to keep breakfast interesting while sticking to your prep routine, and the whole batch comes together in just 30 minutes.

Scroll to the bottom of this post for a printable recipe card with all the ingredients, measurements, and step-by-step instructions.

Ingredients You Need

For the base

  • Eggs: Fresh eggs give the best flavor and texture.
  • Salt

Beef and cheese

  • Ground beef: I like using lean, cooked ground beef. 
  • Cheese

Bacon cheddar

  • Bacon: Crumble cooked bacon so it mixes evenly
  • Cheddar cheese: Freshly shredded mild or sharp cheddar melts better than pre-shredded.

Ham and cheddar

  • Ham: Any cooked, chopped ham will do. Leftovers or sliced deli ham work just as well.
  • Cheddar cheese
  • Garlic powder
  • Onion powder

Buffalo chicken

  • Cooked chicken: Leftover chopped or shredded chicken works great.
  • Buffalo Sauce: Mix it with the chicken before adding to the eggs so everything’s coated evenly. Don’t overdo it or the eggs won’t set right.
  • Green onions: Adds brightness and a little crunch.

Broccoli cheddar

  • Broccoli: Lightly steam and finely chop it so it mixes well without sinking to the bottom.
  • Cheddar cheese
  • Dried thyme
  • Garlic powder

Jalapeno popper

  • Cheddar cheese
  • Cream cheese: Philadelphia is my go-to, but any brand you like is fine.
  • Jalapeño peppers
  • Garlic powder
  • Onion powder

Step-By-Step Instructions

Whisk a few eggs, mix in your favorite ingredients, and let the oven handle the rest. With just 10 minutes of prep, egg bites are a simple way to serve up a hot, flavorful breakfast any day of the week.

Step 1: Prep

Set your oven to 350 F. Lightly grease a standard 6 or 12-cup muffin tin so the egg bites come out easily after baking.

Step 2: Make the batter

Crack the eggs into a large bowl and whisk until well blended. Add your chosen mix-ins and a bit of salt, then give everything a good stir to combine.

Step 3: Bake

Pour the egg mixture evenly into the muffin cups, filling each one about ¾ full. Bake for 20 minutes, or until the eggs are fully set.

Step 4: Cool

Once baked, let the egg bites cool in the pan for 5 minutes. Use a knife to gently loosen the edges, then pop them out and either serve warm or let them finish cooling on a wire rack.

Rows of baked muffins, some with visible meat toppings, are cooling on a black wire rack.

Substitutions

Egg bites come down to just two must-haves: eggs and a little salt. Those can’t be swapped, but the mix-ins are totally flexible. Use what you have or change it up to fit your taste. Here are some easy ideas to try:

  • Ground beef: You can swap this with ground pork, sausage, or ground bison.
  • Bacon: Turkey bacon is a good alternative.
  • Cheddar cheese: Colby Jack, Monterey Jack, Gouda, or Provolone are all great melty options.
  • Cooked chicken: Canned chicken, rotisserie chicken, or tofu crumbles work just as well.
  • Buffalo sauce: Use your favorite store-bought version or swap in other favorite sauces.
  • Green onions: Chives or finely chopped leeks can be used instead.
  • Broccoli: Cauliflower, kale, or spinach are easy substitutes. Just chop them finely so they mix in evenly.
  • Dried thyme: Italian seasoning, oregano, or rosemary are good options. Use a little at first and adjust to your taste.
  • Cream cheese: For a lighter choice, go with Greek yogurt. Ricotta also works, though it’s a bit milder. If you want more flavor, try using a French onion or spring onion dip.
  • Jalapeño peppers: Pickled jalapeños, green chiles, or bell peppers are great options, depending on how spicy you want it.
Freshly baked egg muffins with golden tops and green herb specks rest on a cooling rack.

Expert Tips

  • Cool before storing: Cooling completely before storing keeps condensation from building up and making the muffins rubbery.
  • Whisk well: Fully whisked eggs with a bit of froth help create a lighter, fluffier texture in every bite.
  • Don’t fill too high: Filling the muffin cups only three-quarters full gives the eggs space to puff up without overflowing.
  • Cook watery ingredients first: Sautéing ingredients like spinach, mushrooms, or tomatoes prevents extra moisture from making the muffins soggy.
  • Creamy texture: Mixing in one tablespoon of milk for every four eggs gives the muffins a softer, richer consistency.
Broccoli and cheese muffins are sliced open to reveal a tender, veggie-filled interior.

How to Store This Recipe

Let the scrambled egg muffins cool all the way before packing them up. Once they’re at room temperature, transfer to an airtight container or a resealable bag and store in the fridge for 4 to 5 days.

If you want to freeze them, wrap each one in parchment or plastic wrap first, then place them in a freezer-safe container or bag. They’ll keep well for up to a month. Don’t forget to label the date so you can keep track. You can eat them cold or pop them in the oven to warm them up before serving.

How to Serve Egg Bites

These egg bites are super versatile, so it’s easy to build a meal around them. Keep it light with just a topping of whipped feta cheese dip or a side of fresh fruit, sliced avocado, or a crisp salad.  We love them with avocado salad and spicy beef tapa for brunch!

Want something a bit more filling? Add a side of roasted potatoes or toast up your favorite bread. I usually reach for garlic bread when I have it on hand. And if you’re rushing out the door, they go perfectly with a pineapple and strawberry smoothie or a hot coffee for a no-fuss, satisfying start.

A close-up of double-stacked muffins shows off their crispy ham tops and fluffy, cheesy texture.

More Easy Make-Ahead Breakfast Recipes To Try

Baked egg bites featuring visible slices of ham on a cooling wrack.

Oven-Baked Egg Bites Recipe

Author: Jessica Haggard
You won’t want to skip breakfast once these egg bites are in the rotation. The base needs just 2 ingredients, and the flavor options are wide open. It takes just 10 minutes to prep, then the oven takes it from there.
No ratings yet
Prep Time 10 minutes
Cook Time 20 minutes
Total Time 30 minutes
Course Breakfast
Cuisine American
Servings 12 egg bites
Calories 597 kcal

Ingredients
 
 

For the base:

  • 9 large eggs
  • ½ teaspoon salt

BEEF AND CHEESE

  • 8 ounces ground beef cooked

BACON CHEDDAR

  • 1 cup cooked bacon crumbled
  • 1 cup cheddar cheese shredded

HAM AND CHEDDAR

BUFFALO CHICKEN

  • 1 cup cooked chicken chopped or shredded
  • cup buffalo sauce
  • cup green onions chopped

BROCCOLI CHEDDAR

  • 1 ½ cups broccoli steamed and chopped
  • 1 cup cheddar cheese shredded
  • ½ teaspoon dried thyme
  • ½ teaspoon garlic powder

JALAPENO POPPER

  • ½ cup cheddar cheese shredded
  • cup cream cheese softened
  • 4 small jalapeño peppers de-seeded and chopped
  • ½ teaspoon garlic powder
  • ½ teaspoon onion powder

Instructions
 

  • Set your oven to 350 °F. Lightly grease a standard 6 or 12-cup muffin tin so the egg bites come out easily after baking.
  • Crack the eggs into a large bowl and whisk until well blended. Add your chosen mix-ins and a bit of salt, then give everything a good stir to combine.
  • Pour the egg mixture evenly into the muffin cups, filling each one about ¾ full. Bake for 20 minutes, or until the eggs are fully set.
  • Once baked, let the egg bites cool in the pan for 5 minutes. Use a knife to gently loosen the edges, then pop them out and either serve warm or let them finish cooling on a wire rack.

Notes

  • Cooling completely before storing keeps condensation from building up and making the muffins rubbery.
  • Filling the muffin cups only three-quarters full gives the eggs space to puff up without overflowing.
  • Mixing in one tablespoon of milk for every four eggs gives the muffins a softer, richer consistency.
Serve: On their own or with fruit, avocado, roasted potatoes or toast. They’re also great with a smoothie or coffee when you’re on the go.
Store: Let them cool, then store in an airtight container. Keep in the fridge for 4 to 5 days or freeze for up to a month. Label the date, and enjoy cold or reheat in the oven.

Nutrition

Serving: 1egg muffinCalories: 597kcalCarbohydrates: 5gProtein: 18gFat: 56gSaturated Fat: 22gPolyunsaturated Fat: 2gMonounsaturated Fat: 8gTrans Fat: 0.3gCholesterol: 214mgSodium: 726mgPotassium: 353mgFiber: 1gSugar: 2gVitamin A: 839IUVitamin C: 44mgCalcium: 257mgIron: 2mg
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